Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Nub1P54729 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.1□□□□□ -0.31
Nub1P54729 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.1□□□□□ -0.31
Nub1P54729 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.1□□□□□ -0.31
Nub1P54729 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nub1P54729 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.09□□□□□ -0.31
Nub1P54729 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.09□□□□□ -0.31
Nub1P54729 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Gm14109-201ENSMUST00000118814 309 ntBASIC13.09□□□□□ -0.31
Nub1P54729 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.09□□□□□ -0.31
Nub1P54729 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Gm17376-201ENSMUST00000166016 84 ntBASIC13.09□□□□□ -0.31
Nub1P54729 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.09□□□□□ -0.31
Nub1P54729 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nub1P54729 Gm20482-202ENSMUST00000174729 825 ntBASIC13.09□□□□□ -0.31
Nub1P54729 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Gm4034-201ENSMUST00000187674 480 ntBASIC13.09□□□□□ -0.31
Nub1P54729 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.09□□□□□ -0.31
Nub1P54729 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.09□□□□□ -0.31
Nub1P54729 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.09□□□□□ -0.31
Nub1P54729 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.09□□□□□ -0.31
Nub1P54729 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.09□□□□□ -0.31
Nub1P54729 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.09□□□□□ -0.31
Nub1P54729 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.09□□□□□ -0.31
Nub1P54729 Thoc7-209ENSMUST00000225325 765 ntBASIC13.09□□□□□ -0.31
Nub1P54729 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Nub1P54729 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 CT009713.5-203ENSMUST00000224218 2079 ntBASIC13.09□□□□□ -0.31
Nub1P54729 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Gm37513-201ENSMUST00000194830 2268 ntBASIC13.09□□□□□ -0.31
Nub1P54729 Gm38378-201ENSMUST00000195153 2268 ntBASIC13.09□□□□□ -0.31
Nub1P54729 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Nub1P54729 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Nub1P54729 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.09□□□□□ -0.31
Nub1P54729 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nub1P54729 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Nub1P54729 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Nub1P54729 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.08□□□□□ -0.31
Nub1P54729 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Nub1P54729 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Nub1P54729 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Nub1P54729 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.08□□□□□ -0.31
Nub1P54729 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.08□□□□□ -0.32
Nub1P54729 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Nub1P54729 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Gm12015-201ENSMUST00000117065 843 ntBASIC13.08□□□□□ -0.32
Nub1P54729 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Gm27046-201ENSMUST00000182160 463 ntBASIC13.08□□□□□ -0.32
Nub1P54729 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Nub1P54729 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Nub1P54729 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Nub1P54729 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms