Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
GdnfP48540 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
GdnfP48540 Gm11637-201ENSMUST00000120601 592 ntBASIC10.67□□□□□ -0.7
GdnfP48540 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.67□□□□□ -0.7
GdnfP48540 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Gm37436-201ENSMUST00000193842 1085 ntBASIC10.67□□□□□ -0.7
GdnfP48540 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.67□□□□□ -0.7
GdnfP48540 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.67□□□□□ -0.7
GdnfP48540 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Gm10268-201ENSMUST00000085340 555 ntBASIC10.67□□□□□ -0.7
GdnfP48540 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.67□□□□□ -0.7
GdnfP48540 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.67□□□□□ -0.7
GdnfP48540 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.67□□□□□ -0.7
GdnfP48540 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.67□□□□□ -0.7
GdnfP48540 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.67□□□□□ -0.7
GdnfP48540 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.67□□□□□ -0.7
GdnfP48540 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
GdnfP48540 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
GdnfP48540 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Gm10339-203ENSMUST00000225409 1671 ntBASIC10.66□□□□□ -0.7
GdnfP48540 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
GdnfP48540 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
GdnfP48540 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
GdnfP48540 Gm12291-201ENSMUST00000121627 311 ntBASIC10.66□□□□□ -0.7
GdnfP48540 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.66□□□□□ -0.7
GdnfP48540 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.66□□□□□ -0.7
GdnfP48540 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
GdnfP48540 Gm22121-201ENSMUST00000175148 54 ntBASIC10.66□□□□□ -0.7
GdnfP48540 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.66□□□□□ -0.7
GdnfP48540 Gm43037-201ENSMUST00000196808 250 ntBASIC10.66□□□□□ -0.7
GdnfP48540 Gm43818-201ENSMUST00000200605 466 ntBASIC10.66□□□□□ -0.7
GdnfP48540 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.66□□□□□ -0.7
GdnfP48540 Gm32025-201ENSMUST00000217960 307 ntBASIC10.66□□□□□ -0.7
GdnfP48540 Gm19163-201ENSMUST00000223313 780 ntBASIC10.66□□□□□ -0.7
GdnfP48540 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.66□□□□□ -0.7
GdnfP48540 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
GdnfP48540 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.66□□□□□ -0.7
GdnfP48540 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.66□□□□□ -0.7
GdnfP48540 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.66□□□□□ -0.7
GdnfP48540 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
GdnfP48540 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC10.66□□□□□ -0.7
GdnfP48540 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
GdnfP48540 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
GdnfP48540 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
GdnfP48540 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
GdnfP48540 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
GdnfP48540 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
GdnfP48540 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.65□□□□□ -0.7
GdnfP48540 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
GdnfP48540 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
GdnfP48540 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
GdnfP48540 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
GdnfP48540 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms