Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Gm6244-201ENSMUST00000178732 841 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox2P48432 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox2P48432 Gm6180-201ENSMUST00000065243 498 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sox2P48432 Gm5356-201ENSMUST00000093326 615 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.34□□□□□ -0.59
Sox2P48432 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sox2P48432 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.34□□□□□ -0.59
Sox2P48432 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.34□□□□□ -0.59
Sox2P48432 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.34□□□□□ -0.59
Sox2P48432 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sox2P48432 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Sox2P48432 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sox2P48432 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sox2P48432 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox2P48432 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sox2P48432 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sox2P48432 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox2P48432 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox2P48432 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox2P48432 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Gm9908-201ENSMUST00000211534 448 ntBASIC11.33□□□□□ -0.6
Sox2P48432 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Gm22058-201ENSMUST00000083393 310 ntBASIC11.33□□□□□ -0.6
Sox2P48432 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox2P48432 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.33□□□□□ -0.6
Sox2P48432 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.33□□□□□ -0.6
Sox2P48432 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox2P48432 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox2P48432 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox2P48432 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Sox2P48432 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Gm8515-201ENSMUST00000194852 576 ntBASIC11.32□□□□□ -0.6
Sox2P48432 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.32□□□□□ -0.6
Sox2P48432 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox2P48432 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox2P48432 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.32□□□□□ -0.6
Sox2P48432 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox2P48432 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sox2P48432 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox2P48432 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox2P48432 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox2P48432 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms