Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.55□□□□□ -0.08
Nedd4P46935 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd4P46935 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd4P46935 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd4P46935 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd4P46935 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd4P46935 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd4P46935 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd4P46935 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.55□□□□□ -0.08
Nedd4P46935 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nedd4P46935 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nedd4P46935 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd4P46935 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nedd4P46935 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.55□□□□□ -0.08
Nedd4P46935 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.54□□□□□ -0.08
Nedd4P46935 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Nedd4P46935 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nedd4P46935 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Nedd4P46935 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nedd4P46935 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nedd4P46935 Gm23272-201ENSMUST00000104053 129 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC14.54□□□□□ -0.08
Nedd4P46935 Gm5419-201ENSMUST00000119301 527 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 Gm12453-201ENSMUST00000121981 331 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.54□□□□□ -0.08
Nedd4P46935 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.54□□□□□ -0.08
Nedd4P46935 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.54□□□□□ -0.08
Nedd4P46935 Gm19587-201ENSMUST00000191395 545 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 Trav11n-201ENSMUST00000200113 343 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 Gm44315-201ENSMUST00000203041 219 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC14.54□□□□□ -0.08
Nedd4P46935 Gm14005-208ENSMUST00000223654 681 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC14.54□□□□□ -0.08
Nedd4P46935 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 Gm5451-201ENSMUST00000080545 579 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nedd4P46935 Gm6655-201ENSMUST00000201932 1309 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
Nedd4P46935 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Nedd4P46935 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.54□□□□□ -0.08
Nedd4P46935 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nedd4P46935 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.53□□□□□ -0.08
Nedd4P46935 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.53□□□□□ -0.08
Nedd4P46935 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nedd4P46935 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.53□□□□□ -0.08
Nedd4P46935 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nedd4P46935 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Nedd4P46935 Gm11578-201ENSMUST00000118530 459 ntBASIC14.53□□□□□ -0.08
Nedd4P46935 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC14.53□□□□□ -0.08
Nedd4P46935 Gm7150-201ENSMUST00000122032 981 ntBASIC14.53□□□□□ -0.08
Nedd4P46935 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC14.53□□□□□ -0.08
Nedd4P46935 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC14.53□□□□□ -0.08
Nedd4P46935 Gm24248-201ENSMUST00000157321 322 ntBASIC14.53□□□□□ -0.08
Nedd4P46935 Gm9507-202ENSMUST00000180157 654 ntBASIC14.53□□□□□ -0.08
Nedd4P46935 Gm37981-201ENSMUST00000194280 535 ntBASIC14.53□□□□□ -0.08
Nedd4P46935 Ighv1-2-201ENSMUST00000195325 378 ntBASIC14.53□□□□□ -0.08
Nedd4P46935 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Nedd4P46935 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.53□□□□□ -0.08
Nedd4P46935 Gm6390-201ENSMUST00000215034 589 ntBASIC14.53□□□□□ -0.08
Nedd4P46935 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.53□□□□□ -0.08
Nedd4P46935 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Nedd4P46935 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Nedd4P46935 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nedd4P46935 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms