Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm23596-201ENSMUST00000104304 132 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm14058-201ENSMUST00000116082 735 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm13611-201ENSMUST00000118269 318 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm14724-201ENSMUST00000118400 537 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm12196-201ENSMUST00000120954 262 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm23085-201ENSMUST00000157849 293 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 Mir1943-201ENSMUST00000158276 73 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm43184-201ENSMUST00000197247 542 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.49□□□□□ -0.57
Nkx2-6P43688 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.49□□□□□ -0.57
Nkx2-6P43688 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm26286-201ENSMUST00000104166 134 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm23699-201ENSMUST00000158835 135 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm19353-201ENSMUST00000184561 445 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm7467-201ENSMUST00000185173 652 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Nkx2-6P43688 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm26448-201ENSMUST00000082446 203 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.48□□□□□ -0.57
Nkx2-6P43688 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nkx2-6P43688 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms