Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.41□□□□□ -0.58
Sox6P40645 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox6P40645 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.41□□□□□ -0.58
Sox6P40645 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Sox6P40645 Gm37424-201ENSMUST00000191727 561 ntBASIC11.41□□□□□ -0.58
Sox6P40645 Gm37008-201ENSMUST00000195712 319 ntBASIC11.41□□□□□ -0.58
Sox6P40645 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.41□□□□□ -0.58
Sox6P40645 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox6P40645 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox6P40645 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sox6P40645 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Sox6P40645 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox6P40645 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sox6P40645 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sox6P40645 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox6P40645 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.41□□□□□ -0.58
Sox6P40645 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox6P40645 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
Sox6P40645 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.4□□□□□ -0.58
Sox6P40645 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.4□□□□□ -0.58
Sox6P40645 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox6P40645 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sox6P40645 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sox6P40645 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.4□□□□□ -0.58
Sox6P40645 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Gm11591-201ENSMUST00000120063 702 ntBASIC11.4□□□□□ -0.58
Sox6P40645 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Gm8062-201ENSMUST00000139696 444 ntBASIC11.4□□□□□ -0.58
Sox6P40645 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.4□□□□□ -0.58
Sox6P40645 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.4□□□□□ -0.58
Sox6P40645 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sox6P40645 Gm42599-201ENSMUST00000201308 469 ntBASIC11.4□□□□□ -0.58
Sox6P40645 Gm5904-201ENSMUST00000210286 865 ntBASIC11.4□□□□□ -0.58
Sox6P40645 Gm5781-201ENSMUST00000219792 443 ntBASIC11.4□□□□□ -0.58
Sox6P40645 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Gm24526-201ENSMUST00000082921 158 ntBASIC11.4□□□□□ -0.58
Sox6P40645 Gm26035-201ENSMUST00000083065 308 ntBASIC11.4□□□□□ -0.58
Sox6P40645 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox6P40645 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sox6P40645 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox6P40645 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox6P40645 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.59
Sox6P40645 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Sox6P40645 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.4□□□□□ -0.59
Sox6P40645 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox6P40645 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Sox6P40645 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox6P40645 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Sox6P40645 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.39□□□□□ -0.59
Sox6P40645 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox6P40645 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.39□□□□□ -0.59
Sox6P40645 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Sox6P40645 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.39□□□□□ -0.59
Sox6P40645 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms