Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Chd1P40201 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC17.76■□□□□ 0.43
Chd1P40201 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Chd1P40201 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC17.76■□□□□ 0.43
Chd1P40201 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC17.76■□□□□ 0.43
Chd1P40201 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Gm25343-201ENSMUST00000157460 107 ntBASIC17.76■□□□□ 0.43
Chd1P40201 Gm7211-201ENSMUST00000172692 1118 ntBASIC17.76■□□□□ 0.43
Chd1P40201 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Gm5040-201ENSMUST00000218609 800 ntBASIC17.76■□□□□ 0.43
Chd1P40201 CT025618.1-203ENSMUST00000227008 589 ntBASIC17.76■□□□□ 0.43
Chd1P40201 Gm6478-201ENSMUST00000099450 742 ntBASIC17.76■□□□□ 0.43
Chd1P40201 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Chd1P40201 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Chd1P40201 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC17.75■□□□□ 0.43
Chd1P40201 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC17.75■□□□□ 0.43
Chd1P40201 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC17.75■□□□□ 0.43
Chd1P40201 Gm5976-201ENSMUST00000180794 996 ntBASIC17.75■□□□□ 0.43
Chd1P40201 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Gm42689-201ENSMUST00000202403 404 ntBASIC17.75■□□□□ 0.43
Chd1P40201 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chd1P40201 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chd1P40201 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC17.75■□□□□ 0.43
Chd1P40201 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Chd1P40201 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC17.75■□□□□ 0.43
Chd1P40201 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC17.75■□□□□ 0.43
Chd1P40201 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chd1P40201 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chd1P40201 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Gm18552-201ENSMUST00000187425 538 ntBASIC17.75■□□□□ 0.43
Chd1P40201 Gm9644-201ENSMUST00000212828 1183 ntBASIC17.75■□□□□ 0.43
Chd1P40201 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC17.75■□□□□ 0.43
Chd1P40201 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Chd1P40201 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Chd1P40201 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Chd1P40201 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd1P40201 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Chd1P40201 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd1P40201 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Chd1P40201 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Chd1P40201 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd1P40201 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd1P40201 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd1P40201 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC17.74■□□□□ 0.43
Chd1P40201 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd1P40201 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd1P40201 Gm6755-201ENSMUST00000100598 864 ntBASIC17.74■□□□□ 0.43
Chd1P40201 Gm6740-201ENSMUST00000100617 864 ntBASIC17.74■□□□□ 0.43
Chd1P40201 Gm23132-201ENSMUST00000104254 132 ntBASIC17.74■□□□□ 0.43
Chd1P40201 Gm22495-201ENSMUST00000104492 126 ntBASIC17.74■□□□□ 0.43
Chd1P40201 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC17.74■□□□□ 0.43
Chd1P40201 Gm12736-201ENSMUST00000119330 236 ntBASIC17.74■□□□□ 0.43
Chd1P40201 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC17.74■□□□□ 0.43
Chd1P40201 Gm26313-201ENSMUST00000157770 308 ntBASIC17.74■□□□□ 0.43
Chd1P40201 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Chd1P40201 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC17.74■□□□□ 0.43
Chd1P40201 Gm37723-201ENSMUST00000194480 565 ntBASIC17.74■□□□□ 0.43
Chd1P40201 Wbp1-209ENSMUST00000205023 716 ntBASIC17.74■□□□□ 0.43
Chd1P40201 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC17.74■□□□□ 0.43
Chd1P40201 AC164429.1-201ENSMUST00000224210 518 ntBASIC17.74■□□□□ 0.43
Chd1P40201 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms