Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Rom1P32958 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.57□□□□□ -0.88
Rom1P32958 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC9.57□□□□□ -0.88
Rom1P32958 Gm12928-201ENSMUST00000117115 573 ntBASIC9.57□□□□□ -0.88
Rom1P32958 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC9.57□□□□□ -0.88
Rom1P32958 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC9.57□□□□□ -0.88
Rom1P32958 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC9.57□□□□□ -0.88
Rom1P32958 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC9.57□□□□□ -0.88
Rom1P32958 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
Rom1P32958 Gm5896-201ENSMUST00000189662 1024 ntBASIC9.57□□□□□ -0.88
Rom1P32958 Gm38092-201ENSMUST00000195600 653 ntBASIC9.57□□□□□ -0.88
Rom1P32958 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.57□□□□□ -0.88
Rom1P32958 Gm2824-203ENSMUST00000226189 1228 ntBASIC9.57□□□□□ -0.88
Rom1P32958 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Rom1P32958 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Rom1P32958 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC9.56□□□□□ -0.88
Rom1P32958 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Rom1P32958 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Rom1P32958 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
Rom1P32958 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Gm3365-201ENSMUST00000216296 1480 ntBASIC9.56□□□□□ -0.88
Rom1P32958 Gm45342-201ENSMUST00000210903 1363 ntBASIC9.56□□□□□ -0.88
Rom1P32958 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.56□□□□□ -0.88
Rom1P32958 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.56□□□□□ -0.88
Rom1P32958 Gm10156-201ENSMUST00000122364 462 ntBASIC9.56□□□□□ -0.88
Rom1P32958 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.56□□□□□ -0.88
Rom1P32958 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC9.56□□□□□ -0.88
Rom1P32958 Gm38671-201ENSMUST00000200573 130 ntBASIC9.56□□□□□ -0.88
Rom1P32958 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Rom1P32958 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.56□□□□□ -0.88
Rom1P32958 AC167013.1-201ENSMUST00000228592 202 ntBASIC9.56□□□□□ -0.88
Rom1P32958 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.56□□□□□ -0.88
Rom1P32958 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Rom1P32958 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.56□□□□□ -0.88
Rom1P32958 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
Rom1P32958 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.56□□□□□ -0.88
Rom1P32958 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.56□□□□□ -0.88
Rom1P32958 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Rom1P32958 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Rom1P32958 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
Rom1P32958 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms