Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.45□□□□□ -0.74
Slc6a1P31648 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Cog3-203ENSMUST00000227473 4197 ntBASIC10.45□□□□□ -0.74
Slc6a1P31648 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.45□□□□□ -0.74
Slc6a1P31648 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.45□□□□□ -0.74
Slc6a1P31648 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Slc6a1P31648 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.45□□□□□ -0.74
Slc6a1P31648 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.44□□□□□ -0.74
Slc6a1P31648 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Slc6a1P31648 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Slc6a1P31648 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.44□□□□□ -0.74
Slc6a1P31648 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Slc6a1P31648 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Slc6a1P31648 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.44□□□□□ -0.74
Slc6a1P31648 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.44□□□□□ -0.74
Slc6a1P31648 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.44□□□□□ -0.74
Slc6a1P31648 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.44□□□□□ -0.74
Slc6a1P31648 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Slc6a1P31648 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Slc6a1P31648 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Slc6a1P31648 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.44□□□□□ -0.74
Slc6a1P31648 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.43□□□□□ -0.74
Slc6a1P31648 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.43□□□□□ -0.74
Slc6a1P31648 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Gm12384-201ENSMUST00000119228 919 ntBASIC10.43□□□□□ -0.74
Slc6a1P31648 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.43□□□□□ -0.74
Slc6a1P31648 Gm38671-201ENSMUST00000200573 130 ntBASIC10.43□□□□□ -0.74
Slc6a1P31648 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Gm16372-201ENSMUST00000073088 450 ntBASIC10.43□□□□□ -0.74
Slc6a1P31648 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Slc6a1P31648 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Slc6a1P31648 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms