Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.89□□□□□ -0.19
Vcam1P29533 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Vcam1P29533 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vcam1P29533 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vcam1P29533 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Vcam1P29533 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.88□□□□□ -0.19
Vcam1P29533 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.88□□□□□ -0.19
Vcam1P29533 Gm23045-201ENSMUST00000175041 96 ntBASIC13.88□□□□□ -0.19
Vcam1P29533 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Vcam1P29533 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Vcam1P29533 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Gm45113-201ENSMUST00000207518 165 ntBASIC13.88□□□□□ -0.19
Vcam1P29533 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.88□□□□□ -0.19
Vcam1P29533 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Vcam1P29533 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vcam1P29533 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vcam1P29533 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vcam1P29533 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.87□□□□□ -0.19
Vcam1P29533 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.87□□□□□ -0.19
Vcam1P29533 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vcam1P29533 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.87□□□□□ -0.19
Vcam1P29533 Gm11246-201ENSMUST00000120880 345 ntBASIC13.87□□□□□ -0.19
Vcam1P29533 Gm11836-201ENSMUST00000121022 441 ntBASIC13.87□□□□□ -0.19
Vcam1P29533 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC13.87□□□□□ -0.19
Vcam1P29533 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC13.87□□□□□ -0.19
Vcam1P29533 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.87□□□□□ -0.19
Vcam1P29533 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.87□□□□□ -0.19
Vcam1P29533 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.87□□□□□ -0.19
Vcam1P29533 Gm37299-201ENSMUST00000193951 826 ntBASIC13.87□□□□□ -0.19
Vcam1P29533 Gm38151-201ENSMUST00000195085 289 ntBASIC13.87□□□□□ -0.19
Vcam1P29533 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.87□□□□□ -0.19
Vcam1P29533 Gm6450-201ENSMUST00000200896 574 ntBASIC13.87□□□□□ -0.19
Vcam1P29533 Gm44980-201ENSMUST00000205826 314 ntBASIC13.87□□□□□ -0.19
Vcam1P29533 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.87□□□□□ -0.19
Vcam1P29533 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Vcam1P29533 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Vcam1P29533 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.87□□□□□ -0.19
Vcam1P29533 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.87□□□□□ -0.19
Vcam1P29533 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Vcam1P29533 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vcam1P29533 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.86□□□□□ -0.19
Vcam1P29533 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.86□□□□□ -0.19
Vcam1P29533 Gm16071-201ENSMUST00000119589 793 ntBASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms