Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ccl6P27784 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Ccl6P27784 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC9.45□□□□□ -0.9
Ccl6P27784 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.45□□□□□ -0.9
Ccl6P27784 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC9.45□□□□□ -0.9
Ccl6P27784 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC9.45□□□□□ -0.9
Ccl6P27784 Gm27501-201ENSMUST00000183599 107 ntBASIC9.45□□□□□ -0.9
Ccl6P27784 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.45□□□□□ -0.9
Ccl6P27784 Gm6013-201ENSMUST00000212264 699 ntBASIC9.45□□□□□ -0.9
Ccl6P27784 AC125350.2-201ENSMUST00000224737 727 ntBASIC9.45□□□□□ -0.9
Ccl6P27784 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ccl6P27784 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ccl6P27784 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
Ccl6P27784 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Gm37513-201ENSMUST00000194830 2268 ntBASIC9.45□□□□□ -0.9
Ccl6P27784 Gm38378-201ENSMUST00000195153 2268 ntBASIC9.45□□□□□ -0.9
Ccl6P27784 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Gm9361-201ENSMUST00000198695 1507 ntBASIC9.45□□□□□ -0.9
Ccl6P27784 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Ccl6P27784 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ccl6P27784 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ccl6P27784 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm5940-201ENSMUST00000117582 1068 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 Gm11531-201ENSMUST00000117614 555 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 Gm13786-201ENSMUST00000122371 333 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC9.44□□□□□ -0.9
Ccl6P27784 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm23119-201ENSMUST00000158610 140 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC9.44□□□□□ -0.9
Ccl6P27784 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm44958-201ENSMUST00000203734 736 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 Gm5950-201ENSMUST00000213337 772 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl6P27784 Morn2-202ENSMUST00000227729 656 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm7399-201ENSMUST00000032395 858 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl6P27784 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl6P27784 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.44□□□□□ -0.9
Ccl6P27784 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ccl6P27784 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ccl6P27784 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.44□□□□□ -0.9
Ccl6P27784 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ccl6P27784 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ccl6P27784 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms