Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
Col8a2P25318 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.11□□□□□ -0.79
Col8a2P25318 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Col8a2P25318 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.11□□□□□ -0.79
Col8a2P25318 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.11□□□□□ -0.79
Col8a2P25318 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.11□□□□□ -0.79
Col8a2P25318 Gm4034-201ENSMUST00000187674 480 ntBASIC10.11□□□□□ -0.79
Col8a2P25318 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 AY036118-201ENSMUST00000200021 923 ntBASIC10.11□□□□□ -0.79
Col8a2P25318 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.11□□□□□ -0.79
Col8a2P25318 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Col8a2P25318 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Col8a2P25318 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Col8a2P25318 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.11□□□□□ -0.79
Col8a2P25318 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.11□□□□□ -0.79
Col8a2P25318 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.11□□□□□ -0.79
Col8a2P25318 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col8a2P25318 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.1□□□□□ -0.79
Col8a2P25318 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Col8a2P25318 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.1□□□□□ -0.79
Col8a2P25318 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Col8a2P25318 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.1□□□□□ -0.79
Col8a2P25318 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.1□□□□□ -0.79
Col8a2P25318 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.1□□□□□ -0.79
Col8a2P25318 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Paupar-201ENSMUST00000194826 3482 ntBASIC10.1□□□□□ -0.79
Col8a2P25318 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.1□□□□□ -0.79
Col8a2P25318 Gm14247-201ENSMUST00000120950 237 ntBASIC10.1□□□□□ -0.79
Col8a2P25318 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Col8a2P25318 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.1□□□□□ -0.79
Col8a2P25318 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.1□□□□□ -0.79
Col8a2P25318 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.1□□□□□ -0.79
Col8a2P25318 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.1□□□□□ -0.79
Col8a2P25318 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Col8a2P25318 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Col8a2P25318 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
Col8a2P25318 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Col8a2P25318 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Col8a2P25318 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Col8a2P25318 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.1□□□□□ -0.79
Col8a2P25318 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Col8a2P25318 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Gm13812-201ENSMUST00000118061 1347 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Gm13810-201ENSMUST00000118584 1347 ntBASIC10.09□□□□□ -0.79
Col8a2P25318 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Col8a2P25318 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms