Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Pde6bP23440 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pde6bP23440 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.29□□□□□ -0.28
Pde6bP23440 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.29□□□□□ -0.28
Pde6bP23440 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pde6bP23440 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Pde6bP23440 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Pde6bP23440 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Pde6bP23440 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.29□□□□□ -0.28
Pde6bP23440 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Pde6bP23440 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pde6bP23440 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pde6bP23440 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.29□□□□□ -0.28
Pde6bP23440 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.29□□□□□ -0.28
Pde6bP23440 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.29□□□□□ -0.28
Pde6bP23440 Gm9211-201ENSMUST00000182882 975 ntBASIC13.29□□□□□ -0.28
Pde6bP23440 Gm18038-201ENSMUST00000197900 485 ntBASIC13.29□□□□□ -0.28
Pde6bP23440 Gm10109-202ENSMUST00000206890 1211 ntBASIC13.29□□□□□ -0.28
Pde6bP23440 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.29□□□□□ -0.28
Pde6bP23440 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.29□□□□□ -0.28
Pde6bP23440 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Pde6bP23440 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pde6bP23440 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pde6bP23440 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pde6bP23440 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.28□□□□□ -0.28
Pde6bP23440 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pde6bP23440 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.28□□□□□ -0.28
Pde6bP23440 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.28□□□□□ -0.28
Pde6bP23440 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.28□□□□□ -0.28
Pde6bP23440 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.28□□□□□ -0.28
Pde6bP23440 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.28□□□□□ -0.28
Pde6bP23440 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.28□□□□□ -0.28
Pde6bP23440 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.28□□□□□ -0.28
Pde6bP23440 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.28□□□□□ -0.28
Pde6bP23440 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pde6bP23440 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.28□□□□□ -0.28
Pde6bP23440 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pde6bP23440 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6bP23440 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6bP23440 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6bP23440 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.27□□□□□ -0.28
Pde6bP23440 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6bP23440 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.27□□□□□ -0.28
Pde6bP23440 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.27□□□□□ -0.28
Pde6bP23440 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6bP23440 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6bP23440 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.27□□□□□ -0.28
Pde6bP23440 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pde6bP23440 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pde6bP23440 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Pde6bP23440 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms