Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.46□□□□□ -0.57
TP20293 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.46□□□□□ -0.57
TP20293 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.46□□□□□ -0.57
TP20293 Gm45331-201ENSMUST00000209868 554 ntBASIC11.46□□□□□ -0.57
TP20293 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
TP20293 Gm21769-201ENSMUST00000211922 111 ntBASIC11.46□□□□□ -0.57
TP20293 Gm39404-201ENSMUST00000216350 313 ntBASIC11.46□□□□□ -0.57
TP20293 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.46□□□□□ -0.57
TP20293 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
TP20293 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.46□□□□□ -0.58
TP20293 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.46□□□□□ -0.58
TP20293 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.46□□□□□ -0.58
TP20293 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
TP20293 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.46□□□□□ -0.58
TP20293 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
TP20293 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.45□□□□□ -0.58
TP20293 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.45□□□□□ -0.58
TP20293 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.45□□□□□ -0.58
TP20293 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
TP20293 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.45□□□□□ -0.58
TP20293 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TP20293 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TP20293 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TP20293 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TP20293 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TP20293 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TP20293 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Gm11531-201ENSMUST00000117614 555 ntBASIC11.45□□□□□ -0.58
TP20293 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.45□□□□□ -0.58
TP20293 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
TP20293 Gm13570-201ENSMUST00000140763 309 ntBASIC11.45□□□□□ -0.58
TP20293 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.45□□□□□ -0.58
TP20293 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.45□□□□□ -0.58
TP20293 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.45□□□□□ -0.58
TP20293 Gm27516-201ENSMUST00000184237 98 ntBASIC11.45□□□□□ -0.58
TP20293 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.45□□□□□ -0.58
TP20293 Gm38266-201ENSMUST00000194931 421 ntBASIC11.45□□□□□ -0.58
TP20293 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.45□□□□□ -0.58
TP20293 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.45□□□□□ -0.58
TP20293 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.45□□□□□ -0.58
TP20293 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.45□□□□□ -0.58
TP20293 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.45□□□□□ -0.58
TP20293 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TP20293 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TP20293 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.45□□□□□ -0.58
TP20293 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.45□□□□□ -0.58
TP20293 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TP20293 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
TP20293 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.45□□□□□ -0.58
TP20293 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TP20293 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TP20293 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TP20293 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
TP20293 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms