Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Sdc1P18828 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Sdc1P18828 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Sdc1P18828 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.9□□□□□ -0.82
Sdc1P18828 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC9.9□□□□□ -0.82
Sdc1P18828 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.9□□□□□ -0.82
Sdc1P18828 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.9□□□□□ -0.82
Sdc1P18828 Gm12036-201ENSMUST00000120008 530 ntBASIC9.9□□□□□ -0.82
Sdc1P18828 Gm5863-201ENSMUST00000121760 1008 ntBASIC9.9□□□□□ -0.82
Sdc1P18828 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.9□□□□□ -0.82
Sdc1P18828 Gm27321-201ENSMUST00000185021 205 ntBASIC9.9□□□□□ -0.82
Sdc1P18828 Gm44335-201ENSMUST00000196879 141 ntBASIC9.9□□□□□ -0.82
Sdc1P18828 Gm44297-201ENSMUST00000198304 141 ntBASIC9.9□□□□□ -0.82
Sdc1P18828 Gm44346-201ENSMUST00000198851 141 ntBASIC9.9□□□□□ -0.82
Sdc1P18828 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC9.9□□□□□ -0.82
Sdc1P18828 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.9□□□□□ -0.82
Sdc1P18828 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Gm15500-202ENSMUST00000071641 1019 ntBASIC9.9□□□□□ -0.82
Sdc1P18828 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Sdc1P18828 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC9.9□□□□□ -0.82
Sdc1P18828 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sdc1P18828 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sdc1P18828 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Sdc1P18828 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sdc1P18828 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Sdc1P18828 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.9□□□□□ -0.83
Sdc1P18828 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Sdc1P18828 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sdc1P18828 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sdc1P18828 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.89□□□□□ -0.83
Sdc1P18828 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.89□□□□□ -0.83
Sdc1P18828 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC9.89□□□□□ -0.83
Sdc1P18828 Rmrp-201ENSMUST00000157463 271 ntBASIC9.89□□□□□ -0.83
Sdc1P18828 Gm18733-201ENSMUST00000173950 856 ntBASIC9.89□□□□□ -0.83
Sdc1P18828 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.89□□□□□ -0.83
Sdc1P18828 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.89□□□□□ -0.83
Sdc1P18828 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.89□□□□□ -0.83
Sdc1P18828 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.89□□□□□ -0.83
Sdc1P18828 AC139580.1-202ENSMUST00000223574 928 ntBASIC9.89□□□□□ -0.83
Sdc1P18828 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.89□□□□□ -0.83
Sdc1P18828 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sdc1P18828 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Sdc1P18828 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Sdc1P18828 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Sdc1P18828 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Sdc1P18828 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Sdc1P18828 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.88□□□□□ -0.83
Sdc1P18828 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms