Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm43014-201ENSMUST00000198568 2443 ntBASIC9.84□□□□□ -0.83
Cdx1P18111 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Cdx1P18111 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cdx1P18111 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.83□□□□□ -0.84
Cdx1P18111 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.83□□□□□ -0.84
Cdx1P18111 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.83□□□□□ -0.84
Cdx1P18111 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Cdx1P18111 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Cdx1P18111 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC9.83□□□□□ -0.84
Cdx1P18111 Gm24644-201ENSMUST00000157114 139 ntBASIC9.83□□□□□ -0.84
Cdx1P18111 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.83□□□□□ -0.84
Cdx1P18111 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC9.83□□□□□ -0.84
Cdx1P18111 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.83□□□□□ -0.84
Cdx1P18111 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC9.83□□□□□ -0.84
Cdx1P18111 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Gm43818-201ENSMUST00000200605 466 ntBASIC9.83□□□□□ -0.84
Cdx1P18111 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.83□□□□□ -0.84
Cdx1P18111 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.83□□□□□ -0.84
Cdx1P18111 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Gm5161-201ENSMUST00000075243 853 ntBASIC9.83□□□□□ -0.84
Cdx1P18111 Gm24447-201ENSMUST00000083977 338 ntBASIC9.83□□□□□ -0.84
Cdx1P18111 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Cdx1P18111 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Cdx1P18111 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Cdx1P18111 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cdx1P18111 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC9.83□□□□□ -0.84
Cdx1P18111 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Gm42913-201ENSMUST00000197936 1853 ntBASIC9.83□□□□□ -0.84
Cdx1P18111 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.83□□□□□ -0.84
Cdx1P18111 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Cdx1P18111 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cdx1P18111 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cdx1P18111 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cdx1P18111 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx1P18111 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cdx1P18111 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.82□□□□□ -0.84
Cdx1P18111 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx1P18111 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC9.82□□□□□ -0.84
Cdx1P18111 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cdx1P18111 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.82□□□□□ -0.84
Cdx1P18111 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cdx1P18111 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC9.82□□□□□ -0.84
Cdx1P18111 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cdx1P18111 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC9.82□□□□□ -0.84
Cdx1P18111 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cdx1P18111 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Cdx1P18111 Gm9630-201ENSMUST00000178304 885 ntBASIC9.82□□□□□ -0.84
Cdx1P18111 Gm9124-201ENSMUST00000191789 1092 ntBASIC9.82□□□□□ -0.84
Cdx1P18111 Gm9113-201ENSMUST00000192510 1018 ntBASIC9.82□□□□□ -0.84
Cdx1P18111 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms