Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc6P10629 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc6P10629 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc6P10629 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc6P10629 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc6P10629 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxc6P10629 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hoxc6P10629 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxc6P10629 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxc6P10629 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.42□□□□□ -0.26
Hoxc6P10629 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.42□□□□□ -0.26
Hoxc6P10629 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Gm24844-201ENSMUST00000158679 127 ntBASIC13.42□□□□□ -0.26
Hoxc6P10629 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Gm3551-201ENSMUST00000190750 664 ntBASIC13.42□□□□□ -0.26
Hoxc6P10629 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Hoxc6P10629 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Gm3793-201ENSMUST00000204973 672 ntBASIC13.42□□□□□ -0.26
Hoxc6P10629 Gm44506-201ENSMUST00000206278 965 ntBASIC13.42□□□□□ -0.26
Hoxc6P10629 Gm19091-201ENSMUST00000208120 978 ntBASIC13.42□□□□□ -0.26
Hoxc6P10629 Gm2875-201ENSMUST00000211333 360 ntBASIC13.42□□□□□ -0.26
Hoxc6P10629 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxc6P10629 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxc6P10629 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.42□□□□□ -0.26
Hoxc6P10629 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.42□□□□□ -0.26
Hoxc6P10629 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.42□□□□□ -0.26
Hoxc6P10629 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Hoxc6P10629 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxc6P10629 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Hoxc6P10629 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Hoxc6P10629 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.42□□□□□ -0.26
Hoxc6P10629 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxc6P10629 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxc6P10629 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.41□□□□□ -0.26
Hoxc6P10629 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.41□□□□□ -0.26
Hoxc6P10629 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.41□□□□□ -0.26
Hoxc6P10629 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.41□□□□□ -0.26
Hoxc6P10629 Gm42657-201ENSMUST00000201746 211 ntBASIC13.41□□□□□ -0.26
Hoxc6P10629 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.41□□□□□ -0.26
Hoxc6P10629 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hoxc6P10629 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.41□□□□□ -0.26
Hoxc6P10629 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.41□□□□□ -0.26
Hoxc6P10629 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.41□□□□□ -0.26
Hoxc6P10629 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.41□□□□□ -0.26
Hoxc6P10629 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.41□□□□□ -0.26
Hoxc6P10629 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Hoxc6P10629 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.41□□□□□ -0.26
Hoxc6P10629 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Hoxc6P10629 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Hoxc6P10629 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxc6P10629 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Hoxc6P10629 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms