Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.34□□□□□ -0.59
Sod1P08228 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.34□□□□□ -0.59
Sod1P08228 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Sod1P08228 Gm28324-201ENSMUST00000187913 264 ntBASIC11.34□□□□□ -0.59
Sod1P08228 Gm42657-201ENSMUST00000201746 211 ntBASIC11.34□□□□□ -0.59
Sod1P08228 Gm2875-201ENSMUST00000211333 360 ntBASIC11.34□□□□□ -0.59
Sod1P08228 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sod1P08228 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sod1P08228 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sod1P08228 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sod1P08228 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sod1P08228 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sod1P08228 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sod1P08228 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.33□□□□□ -0.6
Sod1P08228 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sod1P08228 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sod1P08228 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.33□□□□□ -0.6
Sod1P08228 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.33□□□□□ -0.6
Sod1P08228 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.33□□□□□ -0.6
Sod1P08228 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.33□□□□□ -0.6
Sod1P08228 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.33□□□□□ -0.6
Sod1P08228 Gm7150-201ENSMUST00000122032 981 ntBASIC11.33□□□□□ -0.6
Sod1P08228 Gm13182-201ENSMUST00000122241 312 ntBASIC11.33□□□□□ -0.6
Sod1P08228 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Gm8459-201ENSMUST00000162504 760 ntBASIC11.33□□□□□ -0.6
Sod1P08228 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Gm43852-201ENSMUST00000202098 917 ntBASIC11.33□□□□□ -0.6
Sod1P08228 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sod1P08228 Gm44158-201ENSMUST00000203881 505 ntBASIC11.33□□□□□ -0.6
Sod1P08228 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.33□□□□□ -0.6
Sod1P08228 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC11.33□□□□□ -0.6
Sod1P08228 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.33□□□□□ -0.6
Sod1P08228 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sod1P08228 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sod1P08228 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sod1P08228 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.33□□□□□ -0.6
Sod1P08228 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.33□□□□□ -0.6
Sod1P08228 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sod1P08228 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sod1P08228 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Sod1P08228 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.32□□□□□ -0.6
Sod1P08228 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.32□□□□□ -0.6
Sod1P08228 Gm13937-201ENSMUST00000121000 988 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.32□□□□□ -0.6
Sod1P08228 Gm28937-201ENSMUST00000185413 695 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Gm29400-201ENSMUST00000187208 695 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Gm28662-201ENSMUST00000188446 695 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Gm28251-201ENSMUST00000188835 695 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Gm9136-201ENSMUST00000193368 454 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Gm37318-201ENSMUST00000194325 695 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Gm38017-201ENSMUST00000194768 695 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Gm37287-201ENSMUST00000195449 695 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Gm37793-201ENSMUST00000195548 695 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sod1P08228 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.32□□□□□ -0.6
Sod1P08228 Gm8342-201ENSMUST00000209839 757 ntBASIC11.32□□□□□ -0.6
Sod1P08228 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.32□□□□□ -0.6
Sod1P08228 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms