Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
TnfP06804 Gm24891-201ENSMUST00000104391 136 ntBASIC12.84□□□□□ -0.35
TnfP06804 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Gm12165-201ENSMUST00000117047 342 ntBASIC12.84□□□□□ -0.35
TnfP06804 Gm14724-201ENSMUST00000118400 537 ntBASIC12.84□□□□□ -0.35
TnfP06804 Gm11941-201ENSMUST00000119904 610 ntBASIC12.84□□□□□ -0.35
TnfP06804 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Gm23085-201ENSMUST00000157849 293 ntBASIC12.84□□□□□ -0.35
TnfP06804 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.84□□□□□ -0.35
TnfP06804 Gm2965-201ENSMUST00000198365 343 ntBASIC12.84□□□□□ -0.35
TnfP06804 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.84□□□□□ -0.35
TnfP06804 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Gm10288-201ENSMUST00000084614 537 ntBASIC12.84□□□□□ -0.35
TnfP06804 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
TnfP06804 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TnfP06804 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TnfP06804 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.83□□□□□ -0.35
TnfP06804 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
TnfP06804 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.83□□□□□ -0.35
TnfP06804 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
TnfP06804 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.83□□□□□ -0.36
TnfP06804 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.83□□□□□ -0.36
TnfP06804 Gm23251-201ENSMUST00000103773 110 ntBASIC12.83□□□□□ -0.36
TnfP06804 Gm15004-201ENSMUST00000119192 630 ntBASIC12.83□□□□□ -0.36
TnfP06804 Gm8566-201ENSMUST00000120174 465 ntBASIC12.83□□□□□ -0.36
TnfP06804 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.83□□□□□ -0.36
TnfP06804 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.83□□□□□ -0.36
TnfP06804 Gm19353-201ENSMUST00000184561 445 ntBASIC12.83□□□□□ -0.36
TnfP06804 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.83□□□□□ -0.36
TnfP06804 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.83□□□□□ -0.36
TnfP06804 Gm43947-201ENSMUST00000203019 959 ntBASIC12.83□□□□□ -0.36
TnfP06804 Gm1821-202ENSMUST00000227415 750 ntBASIC12.83□□□□□ -0.36
TnfP06804 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TnfP06804 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.83□□□□□ -0.36
TnfP06804 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
TnfP06804 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TnfP06804 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TnfP06804 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TnfP06804 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.83□□□□□ -0.36
TnfP06804 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TnfP06804 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.82□□□□□ -0.36
TnfP06804 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.82□□□□□ -0.36
TnfP06804 Gm11663-201ENSMUST00000117888 290 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms