Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxa4P06798 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.94□□□□□ -0.5
Hoxa4P06798 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hoxa4P06798 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.94□□□□□ -0.5
Hoxa4P06798 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Gm14028-201ENSMUST00000117434 479 ntBASIC11.94□□□□□ -0.5
Hoxa4P06798 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Gm12266-201ENSMUST00000120311 962 ntBASIC11.94□□□□□ -0.5
Hoxa4P06798 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.94□□□□□ -0.5
Hoxa4P06798 Gm24990-201ENSMUST00000157406 323 ntBASIC11.94□□□□□ -0.5
Hoxa4P06798 Gm17040-202ENSMUST00000170597 889 ntBASIC11.94□□□□□ -0.5
Hoxa4P06798 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.94□□□□□ -0.5
Hoxa4P06798 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Hoxa4P06798 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Hoxa4P06798 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
Hoxa4P06798 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.94□□□□□ -0.5
Hoxa4P06798 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxa4P06798 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hoxa4P06798 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Map1b-203ENSMUST00000223725 2669 ntBASIC11.93□□□□□ -0.5
Hoxa4P06798 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.93□□□□□ -0.5
Hoxa4P06798 Gm15711-201ENSMUST00000118889 535 ntBASIC11.93□□□□□ -0.5
Hoxa4P06798 Gm14208-201ENSMUST00000119645 678 ntBASIC11.93□□□□□ -0.5
Hoxa4P06798 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Gm19287-201ENSMUST00000203190 358 ntBASIC11.93□□□□□ -0.5
Hoxa4P06798 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Gm18730-201ENSMUST00000218038 343 ntBASIC11.93□□□□□ -0.5
Hoxa4P06798 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Gm26448-201ENSMUST00000082446 203 ntBASIC11.93□□□□□ -0.5
Hoxa4P06798 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.93□□□□□ -0.5
Hoxa4P06798 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Hoxa4P06798 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.93□□□□□ -0.5
Hoxa4P06798 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxa4P06798 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.92□□□□□ -0.5
Hoxa4P06798 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hoxa4P06798 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Hoxa4P06798 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hoxa4P06798 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms