Protein–RNA interactions for Protein: P00375

Dhfr, Dihydrofolate reductase, mousemouse

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DhfrP00375 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.99□□□□□ -0.65
DhfrP00375 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.99□□□□□ -0.65
DhfrP00375 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.99□□□□□ -0.65
DhfrP00375 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.99□□□□□ -0.65
DhfrP00375 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
DhfrP00375 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.99□□□□□ -0.65
DhfrP00375 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.99□□□□□ -0.65
DhfrP00375 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
DhfrP00375 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
DhfrP00375 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.99□□□□□ -0.65
DhfrP00375 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Gm14127-201ENSMUST00000117906 678 ntBASIC10.99□□□□□ -0.65
DhfrP00375 Gm12384-201ENSMUST00000119228 919 ntBASIC10.99□□□□□ -0.65
DhfrP00375 Gm13369-201ENSMUST00000119442 987 ntBASIC10.99□□□□□ -0.65
DhfrP00375 Gm13123-201ENSMUST00000122173 492 ntBASIC10.99□□□□□ -0.65
DhfrP00375 Gm11978-201ENSMUST00000122315 466 ntBASIC10.99□□□□□ -0.65
DhfrP00375 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC10.99□□□□□ -0.65
DhfrP00375 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Gm29127-201ENSMUST00000188304 517 ntBASIC10.99□□□□□ -0.65
DhfrP00375 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
DhfrP00375 Gm40466-201ENSMUST00000212174 422 ntBASIC10.99□□□□□ -0.65
DhfrP00375 Gm8227-201ENSMUST00000223306 571 ntBASIC10.99□□□□□ -0.65
DhfrP00375 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.99□□□□□ -0.65
DhfrP00375 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
DhfrP00375 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.99□□□□□ -0.65
DhfrP00375 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC10.99□□□□□ -0.65
DhfrP00375 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.99□□□□□ -0.65
DhfrP00375 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
DhfrP00375 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
DhfrP00375 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
DhfrP00375 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
DhfrP00375 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
DhfrP00375 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
DhfrP00375 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
DhfrP00375 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.98□□□□□ -0.65
DhfrP00375 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.98□□□□□ -0.65
DhfrP00375 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
DhfrP00375 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
DhfrP00375 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
DhfrP00375 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.98□□□□□ -0.65
DhfrP00375 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
DhfrP00375 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.98□□□□□ -0.65
DhfrP00375 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Gm45784-201ENSMUST00000188360 142 ntBASIC10.98□□□□□ -0.65
DhfrP00375 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.98□□□□□ -0.65
DhfrP00375 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC10.98□□□□□ -0.65
DhfrP00375 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.98□□□□□ -0.65
DhfrP00375 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.98□□□□□ -0.65
DhfrP00375 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.98□□□□□ -0.65
DhfrP00375 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Gm10146-201ENSMUST00000072739 309 ntBASIC10.98□□□□□ -0.65
DhfrP00375 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
DhfrP00375 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
DhfrP00375 Gm44826-201ENSMUST00000207648 2332 ntBASIC10.98□□□□□ -0.65
DhfrP00375 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.98□□□□□ -0.65
DhfrP00375 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.98□□□□□ -0.65
DhfrP00375 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.98□□□□□ -0.65
DhfrP00375 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
DhfrP00375 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms