Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vti1aO89116 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Vti1aO89116 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Vti1aO89116 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.12□□□□□ -0.31
Vti1aO89116 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vti1aO89116 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Gm14644-201ENSMUST00000116671 647 ntBASIC13.12□□□□□ -0.31
Vti1aO89116 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.12□□□□□ -0.31
Vti1aO89116 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.12□□□□□ -0.31
Vti1aO89116 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.12□□□□□ -0.31
Vti1aO89116 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.12□□□□□ -0.31
Vti1aO89116 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.12□□□□□ -0.31
Vti1aO89116 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vti1aO89116 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.12□□□□□ -0.31
Vti1aO89116 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.12□□□□□ -0.31
Vti1aO89116 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.12□□□□□ -0.31
Vti1aO89116 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vti1aO89116 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Vti1aO89116 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.11□□□□□ -0.31
Vti1aO89116 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.11□□□□□ -0.31
Vti1aO89116 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Gm23949-201ENSMUST00000104027 127 ntBASIC13.11□□□□□ -0.31
Vti1aO89116 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.11□□□□□ -0.31
Vti1aO89116 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.11□□□□□ -0.31
Vti1aO89116 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.11□□□□□ -0.31
Vti1aO89116 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.11□□□□□ -0.31
Vti1aO89116 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.11□□□□□ -0.31
Vti1aO89116 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.11□□□□□ -0.31
Vti1aO89116 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.11□□□□□ -0.31
Vti1aO89116 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Vti1aO89116 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.11□□□□□ -0.31
Vti1aO89116 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Vti1aO89116 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vti1aO89116 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Vti1aO89116 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.1□□□□□ -0.31
Vti1aO89116 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vti1aO89116 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.1□□□□□ -0.31
Vti1aO89116 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.1□□□□□ -0.31
Vti1aO89116 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Vti1aO89116 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.1□□□□□ -0.31
Vti1aO89116 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.1□□□□□ -0.31
Vti1aO89116 Gm9550-201ENSMUST00000161130 862 ntBASIC13.1□□□□□ -0.31
Vti1aO89116 Gm18734-201ENSMUST00000172937 808 ntBASIC13.1□□□□□ -0.31
Vti1aO89116 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.1□□□□□ -0.31
Vti1aO89116 Gm42937-201ENSMUST00000197360 752 ntBASIC13.1□□□□□ -0.31
Vti1aO89116 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.1□□□□□ -0.31
Vti1aO89116 AY036118-201ENSMUST00000200021 923 ntBASIC13.1□□□□□ -0.31
Vti1aO89116 AU022133-201ENSMUST00000200601 873 ntBASIC13.1□□□□□ -0.31
Vti1aO89116 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.1□□□□□ -0.31
Vti1aO89116 Gm7848-201ENSMUST00000210739 718 ntBASIC13.1□□□□□ -0.31
Vti1aO89116 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Vti1aO89116 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Vti1aO89116 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Vti1aO89116 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Vti1aO89116 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms