Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
ClppO88696 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ClppO88696 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.93□□□□□ -0.5
ClppO88696 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ClppO88696 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
ClppO88696 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.93□□□□□ -0.5
ClppO88696 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Gm13570-201ENSMUST00000140763 309 ntBASIC11.93□□□□□ -0.5
ClppO88696 Gm24990-201ENSMUST00000157406 323 ntBASIC11.93□□□□□ -0.5
ClppO88696 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Mir5132-201ENSMUST00000175166 71 ntBASIC11.93□□□□□ -0.5
ClppO88696 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.93□□□□□ -0.5
ClppO88696 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.93□□□□□ -0.5
ClppO88696 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.93□□□□□ -0.5
ClppO88696 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.93□□□□□ -0.5
ClppO88696 Gm44651-201ENSMUST00000207343 372 ntBASIC11.93□□□□□ -0.5
ClppO88696 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.93□□□□□ -0.5
ClppO88696 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.93□□□□□ -0.5
ClppO88696 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.93□□□□□ -0.5
ClppO88696 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.93□□□□□ -0.5
ClppO88696 Gm8712-201ENSMUST00000221090 701 ntBASIC11.93□□□□□ -0.5
ClppO88696 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
ClppO88696 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.93□□□□□ -0.5
ClppO88696 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.93□□□□□ -0.5
ClppO88696 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.93□□□□□ -0.5
ClppO88696 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.93□□□□□ -0.5
ClppO88696 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ClppO88696 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.92□□□□□ -0.5
ClppO88696 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
ClppO88696 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.92□□□□□ -0.5
ClppO88696 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ClppO88696 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.92□□□□□ -0.5
ClppO88696 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
ClppO88696 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
ClppO88696 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ClppO88696 Gm11439-201ENSMUST00000118598 409 ntBASIC11.92□□□□□ -0.5
ClppO88696 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.92□□□□□ -0.5
ClppO88696 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.92□□□□□ -0.5
ClppO88696 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.92□□□□□ -0.5
ClppO88696 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.92□□□□□ -0.5
ClppO88696 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.92□□□□□ -0.5
ClppO88696 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
ClppO88696 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms