Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Gm12138-201ENSMUST00000122180 951 ntBASIC11.18□□□□□ -0.62
Cops4O88544 Gm2231-201ENSMUST00000125661 612 ntBASIC11.18□□□□□ -0.62
Cops4O88544 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.18□□□□□ -0.62
Cops4O88544 Rmrp-201ENSMUST00000157463 271 ntBASIC11.18□□□□□ -0.62
Cops4O88544 Gm17208-201ENSMUST00000168388 535 ntBASIC11.18□□□□□ -0.62
Cops4O88544 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.18□□□□□ -0.62
Cops4O88544 Gm9002-201ENSMUST00000178437 499 ntBASIC11.18□□□□□ -0.62
Cops4O88544 Gm27892-201ENSMUST00000185017 106 ntBASIC11.18□□□□□ -0.62
Cops4O88544 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.18□□□□□ -0.62
Cops4O88544 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.18□□□□□ -0.62
Cops4O88544 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.18□□□□□ -0.62
Cops4O88544 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Cops4O88544 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cops4O88544 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.18□□□□□ -0.62
Cops4O88544 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cops4O88544 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cops4O88544 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.17□□□□□ -0.62
Cops4O88544 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cops4O88544 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cops4O88544 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.17□□□□□ -0.62
Cops4O88544 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.17□□□□□ -0.62
Cops4O88544 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.17□□□□□ -0.62
Cops4O88544 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.17□□□□□ -0.62
Cops4O88544 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cops4O88544 Gm15806-201ENSMUST00000120696 955 ntBASIC11.17□□□□□ -0.62
Cops4O88544 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Cops4O88544 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.17□□□□□ -0.62
Cops4O88544 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Gm27486-201ENSMUST00000184923 80 ntBASIC11.17□□□□□ -0.62
Cops4O88544 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.17□□□□□ -0.62
Cops4O88544 Gm9794-201ENSMUST00000202370 423 ntBASIC11.17□□□□□ -0.62
Cops4O88544 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.17□□□□□ -0.62
Cops4O88544 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cops4O88544 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.17□□□□□ -0.62
Cops4O88544 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cops4O88544 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cops4O88544 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cops4O88544 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms