Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Itgb3O54890 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.84□□□□□ -0.35
Itgb3O54890 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Itgb3O54890 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Itgb3O54890 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.84□□□□□ -0.35
Itgb3O54890 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.84□□□□□ -0.35
Itgb3O54890 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.84□□□□□ -0.35
Itgb3O54890 Mir5132-201ENSMUST00000175166 71 ntBASIC12.84□□□□□ -0.35
Itgb3O54890 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.84□□□□□ -0.35
Itgb3O54890 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Itgb3O54890 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Itgb3O54890 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Itgb3O54890 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Itgb3O54890 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.84□□□□□ -0.35
Itgb3O54890 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Itgb3O54890 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Itgb3O54890 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.84□□□□□ -0.35
Itgb3O54890 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Itgb3O54890 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Itgb3O54890 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Itgb3O54890 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Itgb3O54890 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Itgb3O54890 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Itgb3O54890 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.83□□□□□ -0.35
Itgb3O54890 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Itgb3O54890 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Itgb3O54890 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.83□□□□□ -0.36
Itgb3O54890 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Itgb3O54890 Mir5120-201ENSMUST00000175020 78 ntBASIC12.83□□□□□ -0.36
Itgb3O54890 Mir7677-201ENSMUST00000184226 67 ntBASIC12.83□□□□□ -0.36
Itgb3O54890 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.83□□□□□ -0.36
Itgb3O54890 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Itgb3O54890 Gm8956-201ENSMUST00000203939 825 ntBASIC12.83□□□□□ -0.36
Itgb3O54890 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Itgb3O54890 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Itgb3O54890 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Itgb3O54890 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.82□□□□□ -0.36
Itgb3O54890 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.82□□□□□ -0.36
Itgb3O54890 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.82□□□□□ -0.36
Itgb3O54890 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Gm26286-201ENSMUST00000104166 134 ntBASIC12.82□□□□□ -0.36
Itgb3O54890 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Itgb3O54890 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.82□□□□□ -0.36
Itgb3O54890 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.82□□□□□ -0.36
Itgb3O54890 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.82□□□□□ -0.36
Itgb3O54890 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.82□□□□□ -0.36
Itgb3O54890 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Itgb3O54890 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Itgb3O54890 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.82□□□□□ -0.36
Itgb3O54890 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms