Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ChkaO54804 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
ChkaO54804 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
ChkaO54804 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.26□□□□□ -0.45
ChkaO54804 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.26□□□□□ -0.45
ChkaO54804 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.26□□□□□ -0.45
ChkaO54804 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.26□□□□□ -0.45
ChkaO54804 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.26□□□□□ -0.45
ChkaO54804 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ChkaO54804 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.25□□□□□ -0.45
ChkaO54804 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Gm12957-201ENSMUST00000117835 377 ntBASIC12.25□□□□□ -0.45
ChkaO54804 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Gm8062-201ENSMUST00000139696 444 ntBASIC12.25□□□□□ -0.45
ChkaO54804 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Gm24845-201ENSMUST00000158034 109 ntBASIC12.25□□□□□ -0.45
ChkaO54804 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.25□□□□□ -0.45
ChkaO54804 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
ChkaO54804 AY702102-202ENSMUST00000194651 1173 ntBASIC12.25□□□□□ -0.45
ChkaO54804 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.25□□□□□ -0.45
ChkaO54804 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.25□□□□□ -0.45
ChkaO54804 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.25□□□□□ -0.45
ChkaO54804 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
ChkaO54804 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
ChkaO54804 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
ChkaO54804 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.24□□□□□ -0.45
ChkaO54804 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
ChkaO54804 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.24□□□□□ -0.45
ChkaO54804 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 Gm23912-201ENSMUST00000104687 87 ntBASIC12.24□□□□□ -0.45
ChkaO54804 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 Gm14127-201ENSMUST00000117906 678 ntBASIC12.24□□□□□ -0.45
ChkaO54804 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.24□□□□□ -0.45
ChkaO54804 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.24□□□□□ -0.45
ChkaO54804 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.24□□□□□ -0.45
ChkaO54804 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.24□□□□□ -0.45
ChkaO54804 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
ChkaO54804 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.24□□□□□ -0.45
ChkaO54804 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.24□□□□□ -0.45
ChkaO54804 Gm38002-201ENSMUST00000193255 180 ntBASIC12.24□□□□□ -0.45
ChkaO54804 Gm43133-201ENSMUST00000197472 463 ntBASIC12.24□□□□□ -0.45
ChkaO54804 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms