Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Tnfrsf11bO08712 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Gm14247-201ENSMUST00000120950 237 ntBASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Gm38002-201ENSMUST00000193255 180 ntBASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Tnfrsf11bO08712 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Gm9136-201ENSMUST00000193368 454 ntBASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Gm5950-201ENSMUST00000213337 772 ntBASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Gm19309-201ENSMUST00000218295 205 ntBASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Gm9996-201ENSMUST00000070359 913 ntBASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Tnfrsf11bO08712 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.28□□□□□ -0.44
Tnfrsf11bO08712 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.28□□□□□ -0.44
Tnfrsf11bO08712 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Tnfrsf11bO08712 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.28□□□□□ -0.44
Tnfrsf11bO08712 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms