Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh9F8VPK8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pcdh9F8VPK8 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Gm6023-201ENSMUST00000118217 606 ntBASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Gm14247-201ENSMUST00000120950 237 ntBASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Gm17420-201ENSMUST00000164753 153 ntBASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Gm28882-201ENSMUST00000185504 314 ntBASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Gm9136-201ENSMUST00000193368 454 ntBASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Gm19309-201ENSMUST00000218295 205 ntBASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pcdh9F8VPK8 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Gm43133-201ENSMUST00000197472 463 ntBASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdh9F8VPK8 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms