Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gm4984-201ENSMUST00000115987 360 ntBASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gm24644-201ENSMUST00000157114 139 ntBASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gm29649-201ENSMUST00000185649 419 ntBASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gm22058-201ENSMUST00000083393 310 ntBASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdh1F7BJK1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Cog3-203ENSMUST00000227473 4197 ntBASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Gm13736-201ENSMUST00000119272 253 ntBASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdh1F7BJK1 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms