Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm14108-201ENSMUST00000122234 494 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm24992-201ENSMUST00000157412 130 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm38117-201ENSMUST00000194653 939 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm33180-201ENSMUST00000217109 1480 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 AC093022.4-203ENSMUST00000228523 2657 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm37348-201ENSMUST00000193104 1789 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm6758-201ENSMUST00000119643 1055 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Fam209-201ENSMUST00000029007 698 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm36990-201ENSMUST00000191961 1412 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Ssr1-203ENSMUST00000225246 1825 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Dapk1-207ENSMUST00000226059 5009 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm17764-201ENSMUST00000185925 391 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm3926-201ENSMUST00000223378 1123 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm7642-201ENSMUST00000216345 1809 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm10584-201ENSMUST00000207036 2628 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm5529-201ENSMUST00000165691 891 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm29101-201ENSMUST00000188329 1471 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 2310016D03Rik-201ENSMUST00000190206 1547 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm44236-201ENSMUST00000204492 513 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Gm7424-201ENSMUST00000206919 902 ntBASIC6.54□□□□□ -1.36
Herc1E9PZP8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Herc1E9PZP8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Gm16329-201ENSMUST00000148174 371 ntBASIC6.53□□□□□ -1.36
Herc1E9PZP8 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Milr1-202ENSMUST00000106794 1514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Gm36670-202ENSMUST00000210400 1405 ntTSL 5 BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Herc1E9PZP8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms