Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Srp54bE9PXC0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Gm11511-201ENSMUST00000118146 540 ntBASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Gm9550-201ENSMUST00000161130 862 ntBASIC11.99□□□□□ -0.49
Srp54bE9PXC0 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Gm4607-201ENSMUST00000206649 577 ntBASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Gm4157-201ENSMUST00000211647 679 ntBASIC11.99□□□□□ -0.49
Srp54bE9PXC0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.99□□□□□ -0.49
Srp54bE9PXC0 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.99□□□□□ -0.49
Srp54bE9PXC0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Gm12165-201ENSMUST00000117047 342 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Gm13408-201ENSMUST00000119822 798 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Gm11941-201ENSMUST00000119904 610 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Gm13935-201ENSMUST00000121859 798 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Gm19353-201ENSMUST00000184561 445 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Gm3332-201ENSMUST00000189337 928 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Ntng1-201ENSMUST00000051253 327 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Srp54bE9PXC0 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Srp54bE9PXC0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms