Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Gm7781-201ENSMUST00000117258 788 ntBASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Gm27316-201ENSMUST00000184884 277 ntBASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 AC158986.2-201ENSMUST00000227487 618 ntBASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Col6a3E9PWQ3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm26379-201ENSMUST00000178125 138 ntBASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm22616-201ENSMUST00000179783 100 ntBASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm24140-201ENSMUST00000122773 326 ntBASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm23555-201ENSMUST00000157815 135 ntBASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm28348-201ENSMUST00000187833 397 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm8754-201ENSMUST00000118391 520 ntBASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm11295-201ENSMUST00000121379 803 ntBASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Col6a3E9PWQ3 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Gm20781-201ENSMUST00000193154 693 ntBASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Gm21736-201ENSMUST00000195399 693 ntBASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Zfp787-203ENSMUST00000207331 376 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Col6a3E9PWQ3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 239.3 ms