Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm23694-201ENSMUST00000179335 110 ntBASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm7741-201ENSMUST00000181445 989 ntBASIC12.22□□□□□ -0.45
Col4a6B1AVK5 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm25148-201ENSMUST00000104611 123 ntBASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm5257-201ENSMUST00000121823 790 ntBASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.22□□□□□ -0.45
Col4a6B1AVK5 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.22□□□□□ -0.45
Col4a6B1AVK5 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Gm12247-201ENSMUST00000117585 670 ntBASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Gm14270-201ENSMUST00000118388 846 ntBASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Gm13019-201ENSMUST00000120000 276 ntBASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Gm43163-201ENSMUST00000196571 442 ntBASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Gm43752-201ENSMUST00000198475 697 ntBASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Gm6390-201ENSMUST00000215034 589 ntBASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a6B1AVK5 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a6B1AVK5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
Col4a6B1AVK5 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a6B1AVK5 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a6B1AVK5 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.21□□□□□ -0.46
Col4a6B1AVK5 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a6B1AVK5 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a6B1AVK5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gm8451-201ENSMUST00000170338 447 ntBASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.2□□□□□ -0.46
Col4a6B1AVK5 Gm24809-201ENSMUST00000175318 271 ntBASIC12.2□□□□□ -0.46
Col4a6B1AVK5 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms