Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.64□□□□□ -0.39
Scn1aA2APX8 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Gm14058-201ENSMUST00000116082 735 ntBASIC12.64□□□□□ -0.39
Scn1aA2APX8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Gm2965-201ENSMUST00000198365 343 ntBASIC12.64□□□□□ -0.39
Scn1aA2APX8 Gm43378-201ENSMUST00000199336 582 ntBASIC12.64□□□□□ -0.39
Scn1aA2APX8 Gm44100-201ENSMUST00000204329 436 ntBASIC12.64□□□□□ -0.39
Scn1aA2APX8 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn1aA2APX8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Gm22334-201ENSMUST00000158070 133 ntBASIC12.63□□□□□ -0.39
Scn1aA2APX8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Gm5733-201ENSMUST00000190232 939 ntBASIC12.63□□□□□ -0.39
Scn1aA2APX8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Gm6867-201ENSMUST00000219165 425 ntBASIC12.63□□□□□ -0.39
Scn1aA2APX8 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.63□□□□□ -0.39
Scn1aA2APX8 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn1aA2APX8 Gm13408-201ENSMUST00000119822 798 ntBASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gm11660-201ENSMUST00000120955 412 ntBASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gm13263-201ENSMUST00000121271 838 ntBASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gm13935-201ENSMUST00000121859 798 ntBASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gm12407-201ENSMUST00000180219 324 ntBASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.62□□□□□ -0.39
Scn1aA2APX8 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Scn1aA2APX8 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms