Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Gm38297-201ENSMUST00000195122 1057 ntBASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 AC129336.2-201ENSMUST00000218053 3086 ntBASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 CT010480.4-201ENSMUST00000224654 2283 ntBASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC8.67□□□□□ -1.02
Trav8-1A0A075B641 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gm8038-201ENSMUST00000164674 2044 ntBASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gm43267-201ENSMUST00000199664 1796 ntBASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gm4875-201ENSMUST00000118257 786 ntBASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gm22175-201ENSMUST00000175007 78 ntBASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gm37277-201ENSMUST00000194052 1111 ntBASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 AC135669.1-202ENSMUST00000216742 540 ntBASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 AC165157.4-201ENSMUST00000220587 139 ntBASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 AC132317.1-201ENSMUST00000227227 962 ntBASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trav8-1A0A075B641 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms