Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Gm18935-201ENSMUST00000212692 664 ntBASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Gm10478-201ENSMUST00000084451 396 ntBASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cldn9Q9Z0S7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cldn9Q9Z0S7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Gm13392-201ENSMUST00000117708 150 ntBASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC11.66□□□□□ -0.54
Cldn9Q9Z0S7 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms