Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf4Q9QZS2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Gm18473-201ENSMUST00000220543 868 ntBASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rnf4Q9QZS2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Gm12151-201ENSMUST00000121374 290 ntBASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Gm23119-201ENSMUST00000158610 140 ntBASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Gm27306-201ENSMUST00000183970 107 ntBASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Gm27989-201ENSMUST00000184721 107 ntBASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Gm37042-201ENSMUST00000193816 581 ntBASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rnf4Q9QZS2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rnf4Q9QZS2 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms