Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Crlf1Q9JM58 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gm37105-201ENSMUST00000192251 2085 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Mir671-201ENSMUST00000102432 98 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gm12579-201ENSMUST00000118040 783 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gm23119-201ENSMUST00000158610 140 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gm26134-201ENSMUST00000178484 110 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Ighv1-2-201ENSMUST00000195325 378 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gm44647-201ENSMUST00000207402 428 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 AC154361.2-201ENSMUST00000224747 943 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Gm37844-201ENSMUST00000192473 4097 ntBASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Crlf1Q9JM58 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Gm24231-201ENSMUST00000104315 133 ntBASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Gm26989-201ENSMUST00000182608 749 ntBASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Mir6407-201ENSMUST00000184510 101 ntBASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Gm3017-201ENSMUST00000203603 1126 ntBASIC9.74□□□□□ -0.85
Crlf1Q9JM58 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Gm37691-201ENSMUST00000192147 2573 ntBASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Crlf1Q9JM58 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms