Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Gm27243-201ENSMUST00000183964 521 ntBASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Cts7-204ENSMUST00000225321 1257 ntBASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Sec61a2Q9JLR1 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Gm14723-201ENSMUST00000118686 215 ntBASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Gm27023-201ENSMUST00000182372 285 ntBASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Gm8227-201ENSMUST00000223306 571 ntBASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Sec61a2Q9JLR1 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a2Q9JLR1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a2Q9JLR1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Sec61a2Q9JLR1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a2Q9JLR1 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a2Q9JLR1 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a2Q9JLR1 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Sec61a2Q9JLR1 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Sec61a2Q9JLR1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a2Q9JLR1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.96□□□□□ -0.66
Sec61a2Q9JLR1 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Sec61a2Q9JLR1 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Gm13875-201ENSMUST00000120162 282 ntBASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Mospd4-201ENSMUST00000180618 576 ntBASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Gm10076-201ENSMUST00000073238 384 ntBASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sec61a2Q9JLR1 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms