Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Gm5312-201ENSMUST00000203728 547 ntBASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Chchd1-203ENSMUST00000224633 557 ntBASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Gm24447-201ENSMUST00000083977 338 ntBASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 P3h1-202ENSMUST00000081606 2820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trem1Q9JKE2 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Gm4875-201ENSMUST00000118257 786 ntBASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Gm27321-201ENSMUST00000185021 205 ntBASIC10.85□□□□□ -0.67
Trem1Q9JKE2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 CT943659.1-201ENSMUST00000215459 326 ntBASIC10.85□□□□□ -0.67
Trem1Q9JKE2 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Gm5161-201ENSMUST00000075243 853 ntBASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trem1Q9JKE2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms