Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Gm26927-201ENSMUST00000182385 965 ntBASIC11.46□□□□□ -0.57
Trim39Q9ESN2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim39Q9ESN2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim39Q9ESN2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Snord83b-201ENSMUST00000104546 94 ntBASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm14921-201ENSMUST00000118643 908 ntBASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm13829-201ENSMUST00000119600 138 ntBASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm38188-201ENSMUST00000192879 856 ntBASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm32025-201ENSMUST00000217960 307 ntBASIC11.45□□□□□ -0.58
Trim39Q9ESN2 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim39Q9ESN2 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms