Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Gm40466-201ENSMUST00000212174 422 ntBASIC11.99□□□□□ -0.49
Lima1Q9ERG0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Lima1Q9ERG0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Gm38092-201ENSMUST00000195600 653 ntBASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Gm44882-201ENSMUST00000205702 802 ntBASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.98□□□□□ -0.49
Lima1Q9ERG0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Gm45496-201ENSMUST00000209918 2917 ntBASIC11.97□□□□□ -0.49
Lima1Q9ERG0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Lima1Q9ERG0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms