Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hmgn3Q9DCB1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hmgn3Q9DCB1 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.4□□□□□ -0.59
Hmgn3Q9DCB1 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.4□□□□□ -0.59
Hmgn3Q9DCB1 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Gm44397-201ENSMUST00000195950 113 ntBASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Gm6218-201ENSMUST00000219812 628 ntBASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hmgn3Q9DCB1 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Gm9022-201ENSMUST00000182482 992 ntBASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Gm27243-201ENSMUST00000183964 521 ntBASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Gm44855-201ENSMUST00000205725 362 ntBASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hmgn3Q9DCB1 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms