Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cpne8Q9DC53 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Gm42693-201ENSMUST00000196779 631 ntBASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Gm17931-201ENSMUST00000208132 634 ntBASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cpne8Q9DC53 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.62□□□□□ -0.39
Cpne8Q9DC53 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Gm6621-201ENSMUST00000193251 772 ntBASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cpne8Q9DC53 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cpne8Q9DC53 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.61□□□□□ -0.39
Cpne8Q9DC53 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne8Q9DC53 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne8Q9DC53 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne8Q9DC53 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Cpne8Q9DC53 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne8Q9DC53 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.61□□□□□ -0.39
Cpne8Q9DC53 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cpne8Q9DC53 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Cpne8Q9DC53 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms