Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Chmp2aQ9DB34 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Gm15276-201ENSMUST00000145953 498 ntBASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Gm25668-201ENSMUST00000157700 129 ntBASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Gm38241-201ENSMUST00000192641 898 ntBASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Gm44882-201ENSMUST00000205702 802 ntBASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chmp2aQ9DB34 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm24830-201ENSMUST00000102024 166 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm25700-201ENSMUST00000177693 110 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 AA914427-201ENSMUST00000193194 1166 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm44651-201ENSMUST00000207343 372 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm45224-201ENSMUST00000208203 414 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm26232-201ENSMUST00000083360 166 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms