Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Gm42599-201ENSMUST00000201308 469 ntBASIC13.35□□□□□ -0.27
Cfap53Q9D439 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.35□□□□□ -0.27
Cfap53Q9D439 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.35□□□□□ -0.27
Cfap53Q9D439 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cfap53Q9D439 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.34□□□□□ -0.27
Cfap53Q9D439 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Gm2991-201ENSMUST00000173338 480 ntBASIC13.34□□□□□ -0.27
Cfap53Q9D439 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Gm30285-201ENSMUST00000214614 422 ntBASIC13.34□□□□□ -0.27
Cfap53Q9D439 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.34□□□□□ -0.27
Cfap53Q9D439 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cfap53Q9D439 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.33□□□□□ -0.27
Cfap53Q9D439 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Cfap53Q9D439 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cfap53Q9D439 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.33□□□□□ -0.27
Cfap53Q9D439 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cfap53Q9D439 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Cfap53Q9D439 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Cfap53Q9D439 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Cfap53Q9D439 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.33□□□□□ -0.28
Cfap53Q9D439 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Gm38266-201ENSMUST00000194931 421 ntBASIC13.33□□□□□ -0.28
Cfap53Q9D439 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.33□□□□□ -0.28
Cfap53Q9D439 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cfap53Q9D439 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.32□□□□□ -0.28
Cfap53Q9D439 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 738 ms