Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx56Q9D0R4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm14247-201ENSMUST00000120950 237 ntBASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm38266-201ENSMUST00000194931 421 ntBASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm45865-201ENSMUST00000211815 945 ntBASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Cts7-204ENSMUST00000225321 1257 ntBASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Ddx56Q9D0R4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Ddx56Q9D0R4 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx56Q9D0R4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ddx56Q9D0R4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ddx56Q9D0R4 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Gm11930-201ENSMUST00000117788 190 ntBASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms