Protein–RNA interactions for Protein: Q9D0F6

Rfc5, Replication factor C subunit 5, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc5Q9D0F6 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfc5Q9D0F6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfc5Q9D0F6 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.63□□□□□ -0.39
Rfc5Q9D0F6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfc5Q9D0F6 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rfc5Q9D0F6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfc5Q9D0F6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rfc5Q9D0F6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfc5Q9D0F6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfc5Q9D0F6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.63□□□□□ -0.39
Rfc5Q9D0F6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Gm12266-201ENSMUST00000120311 962 ntBASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Gm12164-201ENSMUST00000121695 551 ntBASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Gm4607-201ENSMUST00000206649 577 ntBASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rfc5Q9D0F6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Gm4909-201ENSMUST00000118749 794 ntBASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Gm12380-201ENSMUST00000119012 544 ntBASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Gm15610-201ENSMUST00000120584 195 ntBASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Gm17040-202ENSMUST00000170597 889 ntBASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Mir7677-201ENSMUST00000184226 67 ntBASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Gm28450-201ENSMUST00000187349 638 ntBASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Gm8956-201ENSMUST00000203939 825 ntBASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Rps4l-202ENSMUST00000204242 789 ntBASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Rfc5Q9D0F6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Rfc5Q9D0F6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rfc5Q9D0F6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfc5Q9D0F6 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rfc5Q9D0F6 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rfc5Q9D0F6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Rfc5Q9D0F6 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.6□□□□□ -0.39
Rfc5Q9D0F6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.6□□□□□ -0.39
Rfc5Q9D0F6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rfc5Q9D0F6 Gm26286-201ENSMUST00000104166 134 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms