Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Gm14760-201ENSMUST00000121831 999 ntBASIC13.25□□□□□ -0.29
Ssr1Q9CY50 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ssr1Q9CY50 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Gm24231-201ENSMUST00000104315 133 ntBASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Gm15703-201ENSMUST00000120250 880 ntBASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Gm16177-201ENSMUST00000120728 718 ntBASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Gm11424-201ENSMUST00000121929 829 ntBASIC13.24□□□□□ -0.29
Ssr1Q9CY50 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Gm38092-201ENSMUST00000195600 653 ntBASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Gm43818-201ENSMUST00000200605 466 ntBASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Gm40466-201ENSMUST00000212174 422 ntBASIC13.24□□□□□ -0.29
Ssr1Q9CY50 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.24□□□□□ -0.29
Ssr1Q9CY50 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.24□□□□□ -0.29
Ssr1Q9CY50 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Gm13492-201ENSMUST00000119772 665 ntBASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Gm27682-201ENSMUST00000183930 110 ntBASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Gm5904-201ENSMUST00000210286 865 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms