Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Otud1Q9CUB6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Otud1Q9CUB6 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Otud1Q9CUB6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Otud1Q9CUB6 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.58□□□□□ -0.55
Otud1Q9CUB6 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Otud1Q9CUB6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm18827-201ENSMUST00000188341 790 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm45433-201ENSMUST00000209386 247 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm18212-201ENSMUST00000211678 889 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 CT009711.2-202ENSMUST00000224538 973 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Otud1Q9CUB6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.57□□□□□ -0.56
Otud1Q9CUB6 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Gm7722-201ENSMUST00000120646 741 ntBASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Gm37666-201ENSMUST00000194110 866 ntBASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.57□□□□□ -0.56
Otud1Q9CUB6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.57□□□□□ -0.56
Otud1Q9CUB6 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.57□□□□□ -0.56
Otud1Q9CUB6 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.57□□□□□ -0.56
Otud1Q9CUB6 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms